Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Idnk-204ENSMUST00000226010 1898 ntBASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdhgc5Q91XW9 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Gm24589-201ENSMUST00000116692 94 ntBASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Gm9731-201ENSMUST00000209480 747 ntBASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhgc5Q91XW9 Haglr-201ENSMUST00000100000 2085 ntBASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhgc5Q91XW9 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhgc5Q91XW9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Gm26039-201ENSMUST00000158152 144 ntBASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Gm18958-201ENSMUST00000174258 762 ntBASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Il3ra-202ENSMUST00000223589 738 ntBASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhgc5Q91XW9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhgc5Q91XW9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms