Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Gm37025-201ENSMUST00000195159 829 ntBASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Gm9731-201ENSMUST00000209480 747 ntBASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Gm7370-201ENSMUST00000219471 767 ntBASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Il3ra-202ENSMUST00000223589 738 ntBASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx41Q91VN6 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Idnk-204ENSMUST00000226010 1898 ntBASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Gm13474-201ENSMUST00000122466 815 ntBASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx41Q91VN6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Gm7367-201ENSMUST00000057611 492 ntBASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx41Q91VN6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Gm10819-201ENSMUST00000099988 561 ntBASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx41Q91VN6 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx41Q91VN6 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx41Q91VN6 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
Ddx41Q91VN6 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Ddx41Q91VN6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx41Q91VN6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.69
Ddx41Q91VN6 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ddx41Q91VN6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx41Q91VN6 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx41Q91VN6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx41Q91VN6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx41Q91VN6 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx41Q91VN6 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx41Q91VN6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx41Q91VN6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms