Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb17Q91VD8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb17Q91VD8 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Gm22993-201ENSMUST00000175423 254 ntBASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Mir1668-201ENSMUST00000184114 107 ntBASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb17Q91VD8 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb17Q91VD8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb17Q91VD8 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb17Q91VD8 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb17Q91VD8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Pcdhb17Q91VD8 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Gm13899-201ENSMUST00000121519 1255 ntBASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Gm45574-201ENSMUST00000210921 331 ntBASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Gm18032-201ENSMUST00000222541 538 ntBASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb17Q91VD8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Gm7213-201ENSMUST00000215977 950 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms