Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Tram1Q91V04 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tram1Q91V04 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Tram1Q91V04 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tram1Q91V04 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tram1Q91V04 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tram1Q91V04 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tram1Q91V04 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tram1Q91V04 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.57□□□□□ -0.08
Tram1Q91V04 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Tram1Q91V04 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tram1Q91V04 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Tram1Q91V04 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Tram1Q91V04 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Mir2861-201ENSMUST00000175539 82 ntBASIC14.57□□□□□ -0.08
Tram1Q91V04 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.57□□□□□ -0.08
Tram1Q91V04 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Tram1Q91V04 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Tram1Q91V04 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Tram1Q91V04 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Tram1Q91V04 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tram1Q91V04 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.56□□□□□ -0.08
Tram1Q91V04 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Gm13401-201ENSMUST00000117074 291 ntBASIC14.56□□□□□ -0.08
Tram1Q91V04 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Tram1Q91V04 Gm42778-201ENSMUST00000199644 553 ntBASIC14.56□□□□□ -0.08
Tram1Q91V04 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.56□□□□□ -0.08
Tram1Q91V04 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.56□□□□□ -0.08
Tram1Q91V04 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Tram1Q91V04 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Tram1Q91V04 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tram1Q91V04 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tram1Q91V04 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Tram1Q91V04 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.55□□□□□ -0.08
Tram1Q91V04 Gm11643-201ENSMUST00000119578 864 ntBASIC14.55□□□□□ -0.08
Tram1Q91V04 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Tram1Q91V04 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.55□□□□□ -0.08
Tram1Q91V04 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.55□□□□□ -0.08
Tram1Q91V04 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.55□□□□□ -0.08
Tram1Q91V04 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.55□□□□□ -0.08
Tram1Q91V04 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Tram1Q91V04 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tram1Q91V04 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms