Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TraipQ8VIG6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.97■□□□□ 0.47
TraipQ8VIG6 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TraipQ8VIG6 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TraipQ8VIG6 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TraipQ8VIG6 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TraipQ8VIG6 Gm18421-201ENSMUST00000204122 625 ntBASIC17.97■□□□□ 0.47
TraipQ8VIG6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TraipQ8VIG6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.97■□□□□ 0.47
TraipQ8VIG6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TraipQ8VIG6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TraipQ8VIG6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TraipQ8VIG6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TraipQ8VIG6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TraipQ8VIG6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TraipQ8VIG6 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TraipQ8VIG6 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TraipQ8VIG6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TraipQ8VIG6 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.96■□□□□ 0.47
TraipQ8VIG6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TraipQ8VIG6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TraipQ8VIG6 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TraipQ8VIG6 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TraipQ8VIG6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TraipQ8VIG6 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.96■□□□□ 0.46
TraipQ8VIG6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.95■□□□□ 0.46
TraipQ8VIG6 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.95■□□□□ 0.46
TraipQ8VIG6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.95■□□□□ 0.46
TraipQ8VIG6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TraipQ8VIG6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TraipQ8VIG6 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.94■□□□□ 0.46
TraipQ8VIG6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TraipQ8VIG6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TraipQ8VIG6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.93■□□□□ 0.46
TraipQ8VIG6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TraipQ8VIG6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TraipQ8VIG6 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.92■□□□□ 0.46
TraipQ8VIG6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TraipQ8VIG6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TraipQ8VIG6 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TraipQ8VIG6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.92■□□□□ 0.46
TraipQ8VIG6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TraipQ8VIG6 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TraipQ8VIG6 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TraipQ8VIG6 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TraipQ8VIG6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TraipQ8VIG6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TraipQ8VIG6 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms