Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Rab3c-203ENSMUST00000224180 967 ntBASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Flg-201ENSMUST00000050758 1488 ntBASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdh18Q8VHR0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Zfp783-201ENSMUST00000095946 670 ntBASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh18Q8VHR0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Gm26524-201ENSMUST00000192339 390 ntBASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Gm37179-201ENSMUST00000194862 823 ntBASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh18Q8VHR0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Gm12933-201ENSMUST00000120203 872 ntBASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh18Q8VHR0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh18Q8VHR0 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms