Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Gm11643-201ENSMUST00000119578 864 ntBASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Rab40cQ8VHQ4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rab40cQ8VHQ4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rab40cQ8VHQ4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rab40cQ8VHQ4 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Rab40cQ8VHQ4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 AV356131-201ENSMUST00000206201 750 ntBASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Rab40cQ8VHQ4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Rab40cQ8VHQ4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rab40cQ8VHQ4 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rab40cQ8VHQ4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rab40cQ8VHQ4 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms