Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rab40bQ8VHP8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Rab40bQ8VHP8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Gm15375-201ENSMUST00000119510 849 ntBASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rab40bQ8VHP8 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rab40bQ8VHP8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rab40bQ8VHP8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rab40bQ8VHP8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rab40bQ8VHP8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rab40bQ8VHP8 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Rab40bQ8VHP8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms