Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Gm22697-201ENSMUST00000175194 63 ntBASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Gm18101-201ENSMUST00000215769 548 ntBASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Gm7213-201ENSMUST00000215977 950 ntBASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rprd1aQ8VDS4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Gm27000-201ENSMUST00000182943 842 ntBASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Gm18032-201ENSMUST00000222541 538 ntBASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rprd1aQ8VDS4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Gm10013-201ENSMUST00000106074 672 ntBASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rprd1aQ8VDS4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Gm7977-201ENSMUST00000193787 748 ntBASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rprd1aQ8VDS4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rprd1aQ8VDS4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms