Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q8VDP2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.57■□□□□ 0.24
Q8VDP2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Q8VDP2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Q8VDP2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
Q8VDP2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.56■□□□□ 0.24
Q8VDP2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.56■□□□□ 0.24
Q8VDP2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.56■□□□□ 0.24
Q8VDP2 Gm43137-201ENSMUST00000198052 594 ntBASIC16.56■□□□□ 0.24
Q8VDP2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.56■□□□□ 0.24
Q8VDP2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Q8VDP2 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.55■□□□□ 0.24
Q8VDP2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC16.55■□□□□ 0.24
Q8VDP2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Q8VDP2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.55■□□□□ 0.24
Q8VDP2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC16.55■□□□□ 0.24
Q8VDP2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.55■□□□□ 0.24
Q8VDP2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.55■□□□□ 0.24
Q8VDP2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.55■□□□□ 0.24
Q8VDP2 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.55■□□□□ 0.24
Q8VDP2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Q8VDP2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Q8VDP2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.54■□□□□ 0.24
Q8VDP2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
Q8VDP2 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.54■□□□□ 0.24
Q8VDP2 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Q8VDP2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Q8VDP2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.54■□□□□ 0.24
Q8VDP2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Q8VDP2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC16.54■□□□□ 0.24
Q8VDP2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.54■□□□□ 0.24
Q8VDP2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Q8VDP2 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Q8VDP2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Q8VDP2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Q8VDP2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Q8VDP2 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.53■□□□□ 0.24
Q8VDP2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.53■□□□□ 0.24
Q8VDP2 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Q8VDP2 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms