Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rpap2Q8VC34 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rpap2Q8VC34 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Rpap2Q8VC34 Gm6433-201ENSMUST00000118634 875 ntBASIC18.54■□□□□ 0.56
Rpap2Q8VC34 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Rpap2Q8VC34 Gm7889-201ENSMUST00000185591 958 ntBASIC18.54■□□□□ 0.56
Rpap2Q8VC34 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.54■□□□□ 0.56
Rpap2Q8VC34 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap2Q8VC34 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap2Q8VC34 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap2Q8VC34 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rpap2Q8VC34 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rpap2Q8VC34 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Gm45058-201ENSMUST00000205810 766 ntBASIC18.52■□□□□ 0.56
Rpap2Q8VC34 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Rpap2Q8VC34 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Rpap2Q8VC34 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Rpap2Q8VC34 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpap2Q8VC34 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpap2Q8VC34 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rpap2Q8VC34 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Gm18959-201ENSMUST00000208954 655 ntBASIC18.51■□□□□ 0.55
Rpap2Q8VC34 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rpap2Q8VC34 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Mir5130-201ENSMUST00000175160 84 ntBASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms