Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc9Q8VC31 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ccdc9Q8VC31 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 Gm8493-201ENSMUST00000196881 489 ntBASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccdc9Q8VC31 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc9Q8VC31 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Ccdc9Q8VC31 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc9Q8VC31 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc9Q8VC31 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ccdc9Q8VC31 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ccdc9Q8VC31 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc9Q8VC31 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc9Q8VC31 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms