Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Vps39Q8R5L3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps39Q8R5L3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps39Q8R5L3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps39Q8R5L3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Haglr-201ENSMUST00000100000 2085 ntBASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps39Q8R5L3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Vps39Q8R5L3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps39Q8R5L3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps39Q8R5L3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps39Q8R5L3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Gm13216-201ENSMUST00000117145 591 ntBASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Gm10653-202ENSMUST00000139570 835 ntBASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.89■□□□□ 0.29
Vps39Q8R5L3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms