Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Gm18101-201ENSMUST00000215769 548 ntBASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3kbp1Q8R550 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3kbp1Q8R550 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Gm33142-201ENSMUST00000193913 867 ntBASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3kbp1Q8R550 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Gm16061-201ENSMUST00000122167 857 ntBASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sh3kbp1Q8R550 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.4■□□□□ 0.38
Sh3kbp1Q8R550 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Sh3kbp1Q8R550 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms