Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Nup35Q8R4R6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup35Q8R4R6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup35Q8R4R6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup35Q8R4R6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup35Q8R4R6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup35Q8R4R6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Nup35Q8R4R6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Nup35Q8R4R6 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Gm6576-201ENSMUST00000169678 883 ntBASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Nup35Q8R4R6 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Nup35Q8R4R6 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Nup35Q8R4R6 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Nup35Q8R4R6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup35Q8R4R6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup35Q8R4R6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Nup35Q8R4R6 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Nup35Q8R4R6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup35Q8R4R6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Nup35Q8R4R6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.8□□□□□ -0.2
Nup35Q8R4R6 Gm26524-201ENSMUST00000192339 390 ntBASIC13.8□□□□□ -0.2
Nup35Q8R4R6 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms