Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup85Q8R480 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup85Q8R480 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Nup85Q8R480 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Nup85Q8R480 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Nup85Q8R480 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup85Q8R480 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup85Q8R480 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup85Q8R480 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup85Q8R480 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.37■□□□□ 0.37
Nup85Q8R480 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup85Q8R480 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup85Q8R480 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Nup85Q8R480 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.37■□□□□ 0.37
Nup85Q8R480 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup85Q8R480 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Nup85Q8R480 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Nup85Q8R480 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Nup85Q8R480 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nup85Q8R480 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Nup85Q8R480 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.36■□□□□ 0.37
Nup85Q8R480 Gm37025-201ENSMUST00000195159 829 ntBASIC17.36■□□□□ 0.37
Nup85Q8R480 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.36■□□□□ 0.37
Nup85Q8R480 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Nup85Q8R480 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.35■□□□□ 0.37
Nup85Q8R480 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Nup85Q8R480 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.35■□□□□ 0.37
Nup85Q8R480 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Nup85Q8R480 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Nup85Q8R480 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Nup85Q8R480 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.35■□□□□ 0.37
Nup85Q8R480 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.35■□□□□ 0.37
Nup85Q8R480 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Nup85Q8R480 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Nup85Q8R480 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.34■□□□□ 0.37
Nup85Q8R480 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.34■□□□□ 0.37
Nup85Q8R480 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.34■□□□□ 0.37
Nup85Q8R480 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Nup85Q8R480 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Nup85Q8R480 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Nup85Q8R480 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.34■□□□□ 0.37
Nup85Q8R480 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Nup85Q8R480 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup85Q8R480 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Nup85Q8R480 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.33■□□□□ 0.37
Nup85Q8R480 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.33■□□□□ 0.37
Nup85Q8R480 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Nup85Q8R480 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Nup85Q8R480 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.33■□□□□ 0.36
Nup85Q8R480 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.33■□□□□ 0.36
Nup85Q8R480 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms