Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atp2a1Q8R429 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp2a1Q8R429 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.9■□□□□ 0.62
Atp2a1Q8R429 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atp2a1Q8R429 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Atp2a1Q8R429 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Atp2a1Q8R429 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Atp2a1Q8R429 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atp2a1Q8R429 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
Atp2a1Q8R429 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atp2a1Q8R429 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Atp2a1Q8R429 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.89■□□□□ 0.61
Atp2a1Q8R429 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atp2a1Q8R429 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atp2a1Q8R429 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atp2a1Q8R429 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atp2a1Q8R429 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Atp2a1Q8R429 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Mir770-201ENSMUST00000103252 94 ntBASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Gm27000-201ENSMUST00000182943 842 ntBASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Gm8969-201ENSMUST00000199694 526 ntBASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atp2a1Q8R429 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Gm6623-201ENSMUST00000173570 544 ntBASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Gm17807-201ENSMUST00000186869 298 ntBASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Atp2a1Q8R429 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atp2a1Q8R429 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Gm27357-201ENSMUST00000183754 135 ntBASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Gm28033-201ENSMUST00000184224 96 ntBASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms