Protein–RNA interactions for Protein: Q8R3B7

Brd8, Bromodomain-containing protein 8, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd8Q8R3B7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brd8Q8R3B7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Brd8Q8R3B7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Brd8Q8R3B7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Brd8Q8R3B7 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Brd8Q8R3B7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Brd8Q8R3B7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Brd8Q8R3B7 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Actl10-202ENSMUST00000226583 1501 ntBASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Brd8Q8R3B7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.25■□□□□ 0.35
Brd8Q8R3B7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Brd8Q8R3B7 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Gm21559-201ENSMUST00000220638 855 ntBASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Gm8587-201ENSMUST00000076538 843 ntBASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Brd8Q8R3B7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Gm26039-201ENSMUST00000158152 144 ntBASIC17.23■□□□□ 0.35
Brd8Q8R3B7 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Brd8Q8R3B7 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Brd8Q8R3B7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms