Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc59Q8R2N0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ccdc59Q8R2N0 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
Ccdc59Q8R2N0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ccdc59Q8R2N0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Gm12896-201ENSMUST00000118430 226 ntBASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ccdc59Q8R2N0 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Gm10812-201ENSMUST00000099864 546 ntBASIC16.02■□□□□ 0.16
Ccdc59Q8R2N0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ccdc59Q8R2N0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc59Q8R2N0 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.01■□□□□ 0.15
Ccdc59Q8R2N0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.01■□□□□ 0.15
Ccdc59Q8R2N0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Ccdc59Q8R2N0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ccdc59Q8R2N0 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms