Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.56■□□□□ 0.24
Trim31Q8R0K2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Gm3375-201ENSMUST00000203929 796 ntBASIC16.56■□□□□ 0.24
Trim31Q8R0K2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trim31Q8R0K2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Haglr-201ENSMUST00000100000 2085 ntBASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trim31Q8R0K2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim31Q8R0K2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Gm15565-201ENSMUST00000118890 427 ntBASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Gm12085-201ENSMUST00000119263 940 ntBASIC16.53■□□□□ 0.24
Trim31Q8R0K2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim31Q8R0K2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim31Q8R0K2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim31Q8R0K2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim31Q8R0K2 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim31Q8R0K2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim31Q8R0K2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim31Q8R0K2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trim31Q8R0K2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms