Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.85■□□□□ 0.93
Smc4Q8CG47 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc4Q8CG47 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Mir770-201ENSMUST00000103252 94 ntBASIC20.84■□□□□ 0.93
Smc4Q8CG47 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc4Q8CG47 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.84■□□□□ 0.93
Smc4Q8CG47 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smc4Q8CG47 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.83■□□□□ 0.93
Smc4Q8CG47 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smc4Q8CG47 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Smc4Q8CG47 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc4Q8CG47 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc4Q8CG47 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC20.83■□□□□ 0.93
Smc4Q8CG47 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc4Q8CG47 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc4Q8CG47 Gm18115-201ENSMUST00000221209 621 ntBASIC20.83■□□□□ 0.93
Smc4Q8CG47 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc4Q8CG47 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc4Q8CG47 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc4Q8CG47 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc4Q8CG47 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc4Q8CG47 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc4Q8CG47 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc4Q8CG47 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.82■□□□□ 0.92
Smc4Q8CG47 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Gm10819-201ENSMUST00000099988 561 ntBASIC20.82■□□□□ 0.92
Smc4Q8CG47 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc4Q8CG47 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Smc4Q8CG47 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc4Q8CG47 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc4Q8CG47 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc4Q8CG47 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc4Q8CG47 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc4Q8CG47 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc4Q8CG47 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc4Q8CG47 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Smc4Q8CG47 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC20.81■□□□□ 0.92
Smc4Q8CG47 Gm45328-201ENSMUST00000210942 917 ntBASIC20.81■□□□□ 0.92
Smc4Q8CG47 AC130713.1-201ENSMUST00000228853 1096 ntBASIC20.81■□□□□ 0.92
Smc4Q8CG47 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc4Q8CG47 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Smc4Q8CG47 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc4Q8CG47 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Smc4Q8CG47 Phf7-203ENSMUST00000226565 1971 ntBASIC20.81■□□□□ 0.92
Smc4Q8CG47 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc4Q8CG47 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc4Q8CG47 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Smc4Q8CG47 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Smc4Q8CG47 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Smc4Q8CG47 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc4Q8CG47 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc4Q8CG47 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Smc4Q8CG47 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms