Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd4Q8CC84 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Mir5133-201ENSMUST00000174955 77 ntBASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd4Q8CC84 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Gm27405-201ENSMUST00000184201 112 ntBASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd4Q8CC84 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lysmd4Q8CC84 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lysmd4Q8CC84 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms