Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Gm4974-201ENSMUST00000209974 875 ntBASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rfx6Q8C7R7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Rfx6Q8C7R7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rfx6Q8C7R7 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rfx6Q8C7R7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Rfx6Q8C7R7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rfx6Q8C7R7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rfx6Q8C7R7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Gm27275-201ENSMUST00000184318 272 ntBASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rfx6Q8C7R7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rfx6Q8C7R7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rfx6Q8C7R7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms