Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Cfap54Q8C6S9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cfap54Q8C6S9 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.21■□□□□ 0.18
Cfap54Q8C6S9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Cfap54Q8C6S9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
Cfap54Q8C6S9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cfap54Q8C6S9 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Cfap54Q8C6S9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Gm14494-201ENSMUST00000118786 435 ntBASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Cfap54Q8C6S9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Cfap54Q8C6S9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Gm44450-201ENSMUST00000199528 114 ntBASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Cfap54Q8C6S9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Gm7230-201ENSMUST00000173026 815 ntBASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Cfap54Q8C6S9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms