Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cpne3Q8BT60 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.35■□□□□ 0.21
Cpne3Q8BT60 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cpne3Q8BT60 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne3Q8BT60 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Gm29257-201ENSMUST00000186115 639 ntBASIC16.34■□□□□ 0.21
Cpne3Q8BT60 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Gm43183-201ENSMUST00000200632 547 ntBASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cpne3Q8BT60 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpne3Q8BT60 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpne3Q8BT60 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Cpne3Q8BT60 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cpne3Q8BT60 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cpne3Q8BT60 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cpne3Q8BT60 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cpne3Q8BT60 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cpne3Q8BT60 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Cpne3Q8BT60 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpne3Q8BT60 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms