Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scfd1Q8BRF7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scfd1Q8BRF7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scfd1Q8BRF7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Scfd1Q8BRF7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scfd1Q8BRF7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.31■□□□□ 0.68
Scfd1Q8BRF7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Scfd1Q8BRF7 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Scfd1Q8BRF7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scfd1Q8BRF7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scfd1Q8BRF7 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.31■□□□□ 0.68
Scfd1Q8BRF7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Scfd1Q8BRF7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Scfd1Q8BRF7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 AC125350.1-201ENSMUST00000225115 903 ntBASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.29■□□□□ 0.68
Scfd1Q8BRF7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scfd1Q8BRF7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scfd1Q8BRF7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms