Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rd3Q8BRE0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rd3Q8BRE0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rd3Q8BRE0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rd3Q8BRE0 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Phf7-203ENSMUST00000226565 1971 ntBASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rd3Q8BRE0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms