Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm5417-201ENSMUST00000079706 384 ntBASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Cpsf4Q8BQZ5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Mir7071-201ENSMUST00000184847 69 ntBASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Gm21814-202ENSMUST00000203277 873 ntBASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cpsf4Q8BQZ5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cpsf4Q8BQZ5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cpsf4Q8BQZ5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cpsf4Q8BQZ5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cpsf4Q8BQZ5 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms