Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Sfr1Q8BP27 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Gm9987-201ENSMUST00000069768 567 ntBASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sfr1Q8BP27 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Gm16061-201ENSMUST00000122167 857 ntBASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Gm13474-201ENSMUST00000122466 815 ntBASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Gm18959-201ENSMUST00000208954 655 ntBASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sfr1Q8BP27 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sfr1Q8BP27 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sfr1Q8BP27 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms