Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.32■□□□□ 0.36
Chmp2bQ8BJF9 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2bQ8BJF9 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.32■□□□□ 0.36
Chmp2bQ8BJF9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Chmp2bQ8BJF9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2bQ8BJF9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Chmp2bQ8BJF9 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Chmp2bQ8BJF9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp2bQ8BJF9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Gm12382-201ENSMUST00000122005 922 ntBASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Gm4974-201ENSMUST00000209974 875 ntBASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp2bQ8BJF9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Gm37292-201ENSMUST00000192062 758 ntBASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp2bQ8BJF9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp2bQ8BJF9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms