Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ccdc40Q8BI79 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ccdc40Q8BI79 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Ccdc40Q8BI79 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Gm9694-201ENSMUST00000193347 1189 ntBASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Ccdc40Q8BI79 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Gm24841-201ENSMUST00000158676 357 ntBASIC17.59■□□□□ 0.41
Ccdc40Q8BI79 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms