Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Depdc1bQ8BH88 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Depdc1bQ8BH88 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Depdc1bQ8BH88 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Depdc1bQ8BH88 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Depdc1bQ8BH88 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Gm11539-201ENSMUST00000119837 557 ntBASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Gm13436-201ENSMUST00000120418 567 ntBASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Gm13559-201ENSMUST00000120476 863 ntBASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Depdc1bQ8BH88 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Depdc1bQ8BH88 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Depdc1bQ8BH88 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Gm24841-201ENSMUST00000158676 357 ntBASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Depdc1bQ8BH88 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms