Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.88□□□□□ -0.03
Slc5a7Q8BGY9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slc5a7Q8BGY9 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Mir2861-201ENSMUST00000175539 82 ntBASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Gm45417-201ENSMUST00000209533 758 ntBASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slc5a7Q8BGY9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Slc5a7Q8BGY9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Zfp783-201ENSMUST00000095946 670 ntBASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Slc5a7Q8BGY9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.03
Slc5a7Q8BGY9 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Slc5a7Q8BGY9 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Gm42778-201ENSMUST00000199644 553 ntBASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Slc5a7Q8BGY9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms