Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim23Q8BGX0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Gm26039-201ENSMUST00000158152 144 ntBASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Gm27389-201ENSMUST00000183622 195 ntBASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trim23Q8BGX0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim23Q8BGX0 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim23Q8BGX0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Gm13186-201ENSMUST00000118031 316 ntBASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim23Q8BGX0 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms