Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Smndc1Q8BGT7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Smndc1Q8BGT7 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Gm10653-202ENSMUST00000139570 835 ntBASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Gm44672-201ENSMUST00000206944 1098 ntBASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.43■□□□□ 0.22
Smndc1Q8BGT7 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Smndc1Q8BGT7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Smndc1Q8BGT7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.4■□□□□ 0.22
Smndc1Q8BGT7 Gm37563-201ENSMUST00000192580 1513 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms