Protein–RNA interactions for Protein: Q8BGJ9

U2af1l4, Splicing factor U2AF 26 kDa subunit, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1l4Q8BGJ9 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1l4Q8BGJ9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1l4Q8BGJ9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
U2af1l4Q8BGJ9 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1l4Q8BGJ9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
U2af1l4Q8BGJ9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1l4Q8BGJ9 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1l4Q8BGJ9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
U2af1l4Q8BGJ9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1l4Q8BGJ9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1l4Q8BGJ9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1l4Q8BGJ9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.93■□□□□ 0.78
U2af1l4Q8BGJ9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
U2af1l4Q8BGJ9 Gm44771-201ENSMUST00000206975 626 ntBASIC19.93■□□□□ 0.78
U2af1l4Q8BGJ9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1l4Q8BGJ9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
U2af1l4Q8BGJ9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Gm28033-201ENSMUST00000184224 96 ntBASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Gm27704-201ENSMUST00000185094 107 ntBASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
U2af1l4Q8BGJ9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
U2af1l4Q8BGJ9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
U2af1l4Q8BGJ9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
U2af1l4Q8BGJ9 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Gm7153-201ENSMUST00000117092 455 ntBASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Gm38027-201ENSMUST00000192315 235 ntBASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
U2af1l4Q8BGJ9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
U2af1l4Q8BGJ9 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms