Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trim6Q8BGE7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trim6Q8BGE7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trim6Q8BGE7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Gm10138-203ENSMUST00000206952 366 ntBASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Gm10654-201ENSMUST00000098653 1633 ntBASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Trim6Q8BGE7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.96■□□□□ 0.46
Trim6Q8BGE7 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trim6Q8BGE7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Trim6Q8BGE7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Gm4968-201ENSMUST00000071458 858 ntBASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trim6Q8BGE7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms