Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ubp1Q811S7 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ubp1Q811S7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Gm2274-201ENSMUST00000184539 609 ntBASIC16.67■□□□□ 0.26
Ubp1Q811S7 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.67■□□□□ 0.26
Ubp1Q811S7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.67■□□□□ 0.26
Ubp1Q811S7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ubp1Q811S7 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Gm6433-201ENSMUST00000118634 875 ntBASIC16.66■□□□□ 0.26
Ubp1Q811S7 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.66■□□□□ 0.26
Ubp1Q811S7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Ubp1Q811S7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Gm9987-201ENSMUST00000069768 567 ntBASIC16.66■□□□□ 0.26
Ubp1Q811S7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ubp1Q811S7 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Gm18958-201ENSMUST00000174258 762 ntBASIC16.65■□□□□ 0.26
Ubp1Q811S7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ubp1Q811S7 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.65■□□□□ 0.26
Ubp1Q811S7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Ubp1Q811S7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Ubp1Q811S7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ubp1Q811S7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ubp1Q811S7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ubp1Q811S7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms