Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim50Q810I2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.49■□□□□ 0.23
Trim50Q810I2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trim50Q810I2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim50Q810I2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim50Q810I2 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim50Q810I2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Trim50Q810I2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim50Q810I2 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.48■□□□□ 0.23
Trim50Q810I2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trim50Q810I2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.48■□□□□ 0.23
Trim50Q810I2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim50Q810I2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.48■□□□□ 0.23
Trim50Q810I2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim50Q810I2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim50Q810I2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim50Q810I2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Trim50Q810I2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim50Q810I2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim50Q810I2 Gm27463-201ENSMUST00000183569 57 ntBASIC16.47■□□□□ 0.23
Trim50Q810I2 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim50Q810I2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim50Q810I2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.47■□□□□ 0.23
Trim50Q810I2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim50Q810I2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim50Q810I2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Trim50Q810I2 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.47■□□□□ 0.23
Trim50Q810I2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.46■□□□□ 0.23
Trim50Q810I2 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Trim50Q810I2 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.46■□□□□ 0.23
Trim50Q810I2 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.46■□□□□ 0.23
Trim50Q810I2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Gm30025-201ENSMUST00000218555 728 ntBASIC16.46■□□□□ 0.23
Trim50Q810I2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.46■□□□□ 0.23
Trim50Q810I2 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim50Q810I2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim50Q810I2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim50Q810I2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim50Q810I2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim50Q810I2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms