Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Nucks1Q80XU3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Gm10653-202ENSMUST00000139570 835 ntBASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Gm20760-201ENSMUST00000179197 648 ntBASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Nucks1Q80XU3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Nucks1Q80XU3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Gm9731-201ENSMUST00000209480 747 ntBASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Nucks1Q80XU3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nucks1Q80XU3 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Gm12085-201ENSMUST00000119263 940 ntBASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.03■□□□□ 0.48
Nucks1Q80XU3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Nucks1Q80XU3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms