Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Gm2213-201ENSMUST00000197485 688 ntBASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ttc28Q80XJ3 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Gm8097-201ENSMUST00000117903 829 ntBASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Ttc28Q80XJ3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Ttc28Q80XJ3 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Gm7230-201ENSMUST00000173026 815 ntBASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.16□□□□□ -0.14
Ttc28Q80XJ3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms