Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vrk1Q80X41 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Gm7461-201ENSMUST00000058918 827 ntBASIC16.13■□□□□ 0.17
Vrk1Q80X41 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.13■□□□□ 0.17
Vrk1Q80X41 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk1Q80X41 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Vrk1Q80X41 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Vrk1Q80X41 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.12■□□□□ 0.17
Vrk1Q80X41 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vrk1Q80X41 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Vrk1Q80X41 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vrk1Q80X41 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.1■□□□□ 0.17
Vrk1Q80X41 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.1■□□□□ 0.17
Vrk1Q80X41 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vrk1Q80X41 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.1■□□□□ 0.17
Vrk1Q80X41 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vrk1Q80X41 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms