Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srrm3Q80WV7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srrm3Q80WV7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Srrm3Q80WV7 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srrm3Q80WV7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Gm12896-201ENSMUST00000118430 226 ntBASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srrm3Q80WV7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms