Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Mir2861-201ENSMUST00000175539 82 ntBASIC16.35■□□□□ 0.21
Trim36Q80WG7 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim36Q80WG7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.34■□□□□ 0.21
Trim36Q80WG7 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim36Q80WG7 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Trim36Q80WG7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim36Q80WG7 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim36Q80WG7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim36Q80WG7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim36Q80WG7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trim36Q80WG7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim36Q80WG7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim36Q80WG7 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.33■□□□□ 0.21
Trim36Q80WG7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Mir1199-201ENSMUST00000117015 119 ntBASIC16.33■□□□□ 0.2
Trim36Q80WG7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim36Q80WG7 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.33■□□□□ 0.2
Trim36Q80WG7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim36Q80WG7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim36Q80WG7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim36Q80WG7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim36Q80WG7 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trim36Q80WG7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms