Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pif1Q80SX8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pif1Q80SX8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.58■□□□□ 0.08
Pif1Q80SX8 Gm27357-201ENSMUST00000183754 135 ntBASIC15.58■□□□□ 0.08
Pif1Q80SX8 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pif1Q80SX8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pif1Q80SX8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pif1Q80SX8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Pif1Q80SX8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pif1Q80SX8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pif1Q80SX8 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.58■□□□□ 0.08
Pif1Q80SX8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.58■□□□□ 0.08
Pif1Q80SX8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pif1Q80SX8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.57■□□□□ 0.08
Pif1Q80SX8 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pif1Q80SX8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pif1Q80SX8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pif1Q80SX8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pif1Q80SX8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pif1Q80SX8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pif1Q80SX8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pif1Q80SX8 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pif1Q80SX8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pif1Q80SX8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Pif1Q80SX8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pif1Q80SX8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.55■□□□□ 0.08
Pif1Q80SX8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.55■□□□□ 0.08
Pif1Q80SX8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pif1Q80SX8 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.54■□□□□ 0.08
Pif1Q80SX8 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pif1Q80SX8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pif1Q80SX8 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.53■□□□□ 0.08
Pif1Q80SX8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pif1Q80SX8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms