Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d21Q7TSG5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d21Q7TSG5 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d21Q7TSG5 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sh3d21Q7TSG5 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Gm7791-201ENSMUST00000219066 539 ntBASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Sh3d21Q7TSG5 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3d21Q7TSG5 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3d21Q7TSG5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3d21Q7TSG5 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
Sh3d21Q7TSG5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3d21Q7TSG5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Sh3d21Q7TSG5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3d21Q7TSG5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Sh3d21Q7TSG5 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Gm27463-201ENSMUST00000183569 57 ntBASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Sh3d21Q7TSG5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Gm18958-201ENSMUST00000174258 762 ntBASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Gm30025-201ENSMUST00000218555 728 ntBASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.5■□□□□ 0.55
Sh3d21Q7TSG5 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sh3d21Q7TSG5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 Gm9484-201ENSMUST00000195892 1159 ntBASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 Il3ra-202ENSMUST00000223589 738 ntBASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sh3d21Q7TSG5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms