Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Chd4Q6PDQ2 Gm16499-203ENSMUST00000204633 2177 ntBASIC22.05■■□□□ 1.12
Chd4Q6PDQ2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd4Q6PDQ2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd4Q6PDQ2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Chd4Q6PDQ2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
Chd4Q6PDQ2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC22.05■■□□□ 1.12
Chd4Q6PDQ2 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC22.04■■□□□ 1.12
Chd4Q6PDQ2 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC22.04■■□□□ 1.12
Chd4Q6PDQ2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC22.04■■□□□ 1.12
Chd4Q6PDQ2 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chd4Q6PDQ2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chd4Q6PDQ2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Chd4Q6PDQ2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Chd4Q6PDQ2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 Gm6443-201ENSMUST00000203599 874 ntBASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 Gm7506-201ENSMUST00000207758 815 ntBASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Chd4Q6PDQ2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Chd4Q6PDQ2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC22.02■■□□□ 1.12
Chd4Q6PDQ2 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd4Q6PDQ2 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Chd4Q6PDQ2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd4Q6PDQ2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd4Q6PDQ2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd4Q6PDQ2 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Chd4Q6PDQ2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Chd4Q6PDQ2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Chd4Q6PDQ2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC22.02■■□□□ 1.11
Chd4Q6PDQ2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC22.02■■□□□ 1.11
Chd4Q6PDQ2 Gm13830-205ENSMUST00000201195 1155 ntBASIC22.02■■□□□ 1.11
Chd4Q6PDQ2 AC108846.1-201ENSMUST00000214531 513 ntBASIC22.02■■□□□ 1.11
Chd4Q6PDQ2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Chd4Q6PDQ2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Chd4Q6PDQ2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Chd4Q6PDQ2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Chd4Q6PDQ2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Chd4Q6PDQ2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Gm32996-201ENSMUST00000199828 1447 ntBASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC22.01■■□□□ 1.11
Chd4Q6PDQ2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Gm1818-201ENSMUST00000169406 1184 ntBASIC22■■□□□ 1.11
Chd4Q6PDQ2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC22■■□□□ 1.11
Chd4Q6PDQ2 AC138767.1-201ENSMUST00000222661 415 ntBASIC22■■□□□ 1.11
Chd4Q6PDQ2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chd4Q6PDQ2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC22■■□□□ 1.11
Chd4Q6PDQ2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Chd4Q6PDQ2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC21.99■■□□□ 1.11
Chd4Q6PDQ2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.99■■□□□ 1.11
Chd4Q6PDQ2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Chd4Q6PDQ2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chd4Q6PDQ2 Gm8349-201ENSMUST00000182720 1003 ntBASIC21.99■■□□□ 1.11
Chd4Q6PDQ2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC21.99■■□□□ 1.11
Chd4Q6PDQ2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Chd4Q6PDQ2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.99■■□□□ 1.11
Chd4Q6PDQ2 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Chd4Q6PDQ2 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC21.99■■□□□ 1.11
Chd4Q6PDQ2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chd4Q6PDQ2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
Chd4Q6PDQ2 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC21.98■■□□□ 1.11
Chd4Q6PDQ2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chd4Q6PDQ2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chd4Q6PDQ2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chd4Q6PDQ2 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.98■■□□□ 1.11
Chd4Q6PDQ2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chd4Q6PDQ2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chd4Q6PDQ2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Chd4Q6PDQ2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Chd4Q6PDQ2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms