Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm5648-201ENSMUST00000122244 1587 ntBASIC18.3■□□□□ 0.52
ShbQ6PD21 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ShbQ6PD21 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShbQ6PD21 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShbQ6PD21 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShbQ6PD21 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ShbQ6PD21 Gm14057-201ENSMUST00000120631 482 ntBASIC18.3■□□□□ 0.52
ShbQ6PD21 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.3■□□□□ 0.52
ShbQ6PD21 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.3■□□□□ 0.52
ShbQ6PD21 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShbQ6PD21 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShbQ6PD21 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShbQ6PD21 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
ShbQ6PD21 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShbQ6PD21 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ShbQ6PD21 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ShbQ6PD21 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ShbQ6PD21 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.29■□□□□ 0.52
ShbQ6PD21 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ShbQ6PD21 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShbQ6PD21 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ShbQ6PD21 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShbQ6PD21 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ShbQ6PD21 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.29■□□□□ 0.52
ShbQ6PD21 Gm5186-201ENSMUST00000218781 920 ntBASIC18.29■□□□□ 0.52
ShbQ6PD21 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.29■□□□□ 0.52
ShbQ6PD21 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.29■□□□□ 0.52
ShbQ6PD21 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShbQ6PD21 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ShbQ6PD21 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
ShbQ6PD21 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ShbQ6PD21 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShbQ6PD21 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ShbQ6PD21 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShbQ6PD21 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShbQ6PD21 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.28■□□□□ 0.52
ShbQ6PD21 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShbQ6PD21 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShbQ6PD21 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ShbQ6PD21 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ShbQ6PD21 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
ShbQ6PD21 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ShbQ6PD21 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ShbQ6PD21 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18.28■□□□□ 0.52
ShbQ6PD21 Chchd1-203ENSMUST00000224633 557 ntBASIC18.28■□□□□ 0.52
ShbQ6PD21 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShbQ6PD21 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ShbQ6PD21 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.28■□□□□ 0.52
ShbQ6PD21 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
ShbQ6PD21 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.28■□□□□ 0.52
ShbQ6PD21 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShbQ6PD21 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShbQ6PD21 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ShbQ6PD21 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ShbQ6PD21 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.27■□□□□ 0.52
ShbQ6PD21 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.27■□□□□ 0.52
ShbQ6PD21 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShbQ6PD21 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ShbQ6PD21 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShbQ6PD21 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShbQ6PD21 H2af-ps-201ENSMUST00000119066 295 ntBASIC18.27■□□□□ 0.52
ShbQ6PD21 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ShbQ6PD21 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ShbQ6PD21 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ShbQ6PD21 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ShbQ6PD21 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
ShbQ6PD21 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ShbQ6PD21 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.26■□□□□ 0.51
ShbQ6PD21 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.26■□□□□ 0.51
ShbQ6PD21 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.26■□□□□ 0.51
ShbQ6PD21 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.26■□□□□ 0.51
ShbQ6PD21 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ShbQ6PD21 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
ShbQ6PD21 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
ShbQ6PD21 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShbQ6PD21 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.25■□□□□ 0.51
ShbQ6PD21 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
ShbQ6PD21 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ShbQ6PD21 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.25■□□□□ 0.51
ShbQ6PD21 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ShbQ6PD21 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShbQ6PD21 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ShbQ6PD21 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShbQ6PD21 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ShbQ6PD21 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms