Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Gm27000-201ENSMUST00000182943 842 ntBASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Herc4Q6PAV2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Gm18958-201ENSMUST00000174258 762 ntBASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Herc4Q6PAV2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Mir6982-201ENSMUST00000184354 68 ntBASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Herc4Q6PAV2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Gm11539-201ENSMUST00000119837 557 ntBASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Gm13436-201ENSMUST00000120418 567 ntBASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Herc4Q6PAV2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Herc4Q6PAV2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Herc4Q6PAV2 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.64■□□□□ 0.58
Herc4Q6PAV2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Herc4Q6PAV2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.64■□□□□ 0.57
Herc4Q6PAV2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Herc4Q6PAV2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Herc4Q6PAV2 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms