Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Abcf1Q6P542 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abcf1Q6P542 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abcf1Q6P542 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Abcf1Q6P542 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Abcf1Q6P542 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.92■□□□□ 0.62
Abcf1Q6P542 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Abcf1Q6P542 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Abcf1Q6P542 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.91■□□□□ 0.62
Abcf1Q6P542 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Abcf1Q6P542 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Gm13401-201ENSMUST00000117074 291 ntBASIC18.9■□□□□ 0.62
Abcf1Q6P542 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Mir2861-201ENSMUST00000175539 82 ntBASIC18.9■□□□□ 0.62
Abcf1Q6P542 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 AC154649.1-201ENSMUST00000227392 384 ntBASIC18.9■□□□□ 0.62
Abcf1Q6P542 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Abcf1Q6P542 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Abcf1Q6P542 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Abcf1Q6P542 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abcf1Q6P542 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abcf1Q6P542 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abcf1Q6P542 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Abcf1Q6P542 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.89■□□□□ 0.61
Abcf1Q6P542 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abcf1Q6P542 Gm15375-201ENSMUST00000119510 849 ntBASIC18.89■□□□□ 0.61
Abcf1Q6P542 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.89■□□□□ 0.61
Abcf1Q6P542 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Abcf1Q6P542 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.89■□□□□ 0.61
Abcf1Q6P542 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Abcf1Q6P542 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Abcf1Q6P542 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Abcf1Q6P542 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Gm10698-201ENSMUST00000182663 604 ntBASIC18.87■□□□□ 0.61
Abcf1Q6P542 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Abcf1Q6P542 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Abcf1Q6P542 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms